CDS

Accession Number TCMCG017C34285
gbkey CDS
Protein Id OMO52526.1
Location join(20744..20909,21552..21648,21847..21928,22077..22243,22336..22379,22765..22809,22910..23066,23151..23299,23402..23566,23657..23790,24594..24757,24902..25021,25203..25281,25473..26132)
GeneID InterPro:IPR013083
Organism Corchorus olitorius
locus_tag COLO4_37135

Protein

Length 742aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01023842.1
Definition Zinc finger, RING/FYVE/PHD-type [Corchorus olitorius]
Locus_tag COLO4_37135

EGGNOG-MAPPER Annotation

COG_category O
Description isoform X1
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K10624        [VIEW IN KEGG]
EC 2.3.2.27        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000209        [VIEW IN EMBL-EBI]
GO:0000302        [VIEW IN EMBL-EBI]
GO:0001101        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005815        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005856        [VIEW IN EMBL-EBI]
GO:0006275        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006479        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006511        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006970        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006979        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008213        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009414        [VIEW IN EMBL-EBI]
GO:0009415        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009635        [VIEW IN EMBL-EBI]
GO:0009636        [VIEW IN EMBL-EBI]
GO:0009651        [VIEW IN EMBL-EBI]
GO:0009743        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010038        [VIEW IN EMBL-EBI]
GO:0010555        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0015630        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016569        [VIEW IN EMBL-EBI]
GO:0016570        [VIEW IN EMBL-EBI]
GO:0016571        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0018193        [VIEW IN EMBL-EBI]
GO:0018195        [VIEW IN EMBL-EBI]
GO:0018216        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0019900        [VIEW IN EMBL-EBI]
GO:0019901        [VIEW IN EMBL-EBI]
GO:0019941        [VIEW IN EMBL-EBI]
GO:0030163        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032259        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034969        [VIEW IN EMBL-EBI]
GO:0034971        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042493        [VIEW IN EMBL-EBI]
GO:0042542        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043414        [VIEW IN EMBL-EBI]
GO:0043632        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044257        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044430        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046677        [VIEW IN EMBL-EBI]
GO:0046686        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0048585        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051052        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051603        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061630        [VIEW IN EMBL-EBI]
GO:0061659        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0072756        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0097237        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901562        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1902882        [VIEW IN EMBL-EBI]
GO:1902883        [VIEW IN EMBL-EBI]
GO:1902884        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTGTTTATTACAAGTTTAAGAGTGCAAAAGATTTTGATTCAATTGCCATGGATGGTCCGTTTATAAGCGTTGGTACTTTGAAAGAAAAAATATTTGAATCAAAGCACTTGGGCAGGGGTACCGACTTCGACCTTGTTGTCACCAATGCCCAAACTAACGAAGAATATCTTGATGAAGCAATGTTAATTCCGAAAAATACTTCTGTATTAATTCGCCGGGTTCCGGGAAGGCCACGCATGCCCATCGTTGCAGCTCAAGAGCCTAAAGTGGAAAATCTGATTGAGAATGCTCAACCAGAAAAGAGTAACTTCCTGGATGCTGACTCATCTGTTCAGAAATATCCTGAAGACTCTGAATGGGATGAATTTGGGAATGATTTATATTCAATCCCTGAAACGCTGCCAGTGCAATCGGGCAATCCACTTCCTGATGCTCCCCCTGCTAATAAAGCTGACGAGGATAGCAAGATTAAGGCTTTAATTGATACGCCTGCCTTGGACTGGCAGCGCCAAGGTGCGGATGGTTTTGGACCTGGTAGAGGCTTTGGAAGGGGAATGGAGCGTAAAACACCTCCTCAGGGCTATGTCTGTCACCGCTGGCATTTTATTCAGCACTGCCCTACAAATGGTGATCCAAACTACGATATTAAAAGGGTGAAGCCTCCGACTGGCATTCCAAAATCAATGCTAATGGCAACTCCAGATGGCTCTTATGCATTGCCAAGTGGAGCAGTTGCAGTTTTGAAGCCTAATGAGGCTGCGTTTGAGAAAGAAATTGAGGGCTTACCTTCCACCCGTTCTGTTGGTGATCTTCCACCTGAGCTCCACTGCCCATTGTGCAAGGAAGTAATGAAAGATGCTGTTCTAACTAGCAAATGTTGTTTTATGAGTTTTTGCGATAAATGTATAAGGGACCACATTATCTCAAAGTCAGTGTGTGTGTGTGGCGCGAAAAACATACTCGCAGATGATCTTCTTCCCAATAAGACCCTAAGAGATACAATTAATCGTATATTGGAGTCTGGTAACAGTAGTGCTGACAATGCTGGGAGCACATTTCAAGTCCAAGATATGGAGTCTGCTCGGTGTCCACAGCCAAAAGTTCCATCTCCTACTACATCTGCTGCGTCAAAGGGAGAGCAGAAACCAACATCGGCTAAGCAAGAAAGTCTTAATTTGGAGGATAAAGCTAATGAGGTGAAGCCTGGGATGGATGGTTTTATGGGTCCTTATGCTGGTGCAATGCCGTATATGGGGGGTTATGGACTAGGTCCACTGGACATGCCATTTGGAGGTGTCAATGTTATGCCTCCAGATCCTTTTGGTGCTCAATACATGTTCCCTCCTGTCCCACCTCAGAGGTGCCTGGATCTTGCTGAGTTTGGAATGGGTATGAATGTTCCCCCACCTATTATGAGCAGAGAGGAATTTGAGGCTCGGCAGGCTGATTTGAGGAGGAAGCGTGAAAATGAGAGACGAGGTGAAAGGGAATTCTCTAGAGATCGGGAATTGGGTAGAGAAGTGAGCAGCAGTGGGGGTGATGTTTCATTGTTGAAGTCGAAATCTAAGCCTATCCCACAAATGATGGGGGGTGACCATCGCCATGAAATTCCTCGGCACCGGTCAGATAGGACCACGCCAGAACGGTCCTTGCGGGACCATGAAGTACCTCCCCGTCCTGCTAAGAGAAAAGCTGACCAACATCATGACCGTGAGCGTGACTATGATTATGATGACCATGACCGTGACCGCGATCGCCATCATCATCATCATCATCATAAATCTGAGTCTTCCAAACTTGCGCCTGAAACAGCCCCAAAAGCCGCTTCCGCGGCTAGTATAGCAGCAATGGATAAGAAGCATAAGGCAAGTGTGTTCTCTCGCATCAGCTTCCCGGAAGGAGAAGTCAGCAAGAAACGAAAGCTATCTTCTGATGCACCTGTATCTTCTGGCCATCACAAGCCATCTTCCAATGGATACTATGATGACTACAAGACTTCTTCAGCAGTTGCCAAGGTAGCTTCTGCTACTGGTGGCGGTGGCGGGAGGAAGAGCAGTAGTAGCAATGCTGTAGATTACGAGTCGAGTGATGATGATAGACATTTCAAAAGGAAGCCGTCAAGGTATGAGTCATCTCCACCACCGTCAGCTGAGTGGGAAGAAGAGGCACGGCATTCGAGAGGATCCAGGGAACGAGAGCGAAGCAGCTACAGTAAACATAGATAG
Protein:  
MAVYYKFKSAKDFDSIAMDGPFISVGTLKEKIFESKHLGRGTDFDLVVTNAQTNEEYLDEAMLIPKNTSVLIRRVPGRPRMPIVAAQEPKVENLIENAQPEKSNFLDADSSVQKYPEDSEWDEFGNDLYSIPETLPVQSGNPLPDAPPANKADEDSKIKALIDTPALDWQRQGADGFGPGRGFGRGMERKTPPQGYVCHRWHFIQHCPTNGDPNYDIKRVKPPTGIPKSMLMATPDGSYALPSGAVAVLKPNEAAFEKEIEGLPSTRSVGDLPPELHCPLCKEVMKDAVLTSKCCFMSFCDKCIRDHIISKSVCVCGAKNILADDLLPNKTLRDTINRILESGNSSADNAGSTFQVQDMESARCPQPKVPSPTTSAASKGEQKPTSAKQESLNLEDKANEVKPGMDGFMGPYAGAMPYMGGYGLGPLDMPFGGVNVMPPDPFGAQYMFPPVPPQRCLDLAEFGMGMNVPPPIMSREEFEARQADLRRKRENERRGEREFSRDRELGREVSSSGGDVSLLKSKSKPIPQMMGGDHRHEIPRHRSDRTTPERSLRDHEVPPRPAKRKADQHHDRERDYDYDDHDRDRDRHHHHHHHKSESSKLAPETAPKAASAASIAAMDKKHKASVFSRISFPEGEVSKKRKLSSDAPVSSGHHKPSSNGYYDDYKTSSAVAKVASATGGGGGRKSSSSNAVDYESSDDDRHFKRKPSRYESSPPPSAEWEEEARHSRGSRERERSSYSKHR